SelectedPublications

Diversity Workbench Flyer and Poster 2012

• Flyer PDF Download
• Poster PDF Download

Diversity Workbench Flyer 2014

• Flyer PDF Download

DiversityMobile Flyer and Poster 2014

• Flyer PDF Download
• Poster PDF Download

IBF publications starting with 2009:

https://mbgserv18.mobot.org/ocs/index.php/tdwg/2014/paper/view/758 https://mbgserv18.mobot.org/ocs/index.php/tdwg/2014/paper/view/683

• Diepenbroek, M., Glöckner, F., Grobe, P., Güntsch, A., Huber, R., König-Ries, B., Kostadinov, I., Nieschulze, J., Seeger, B.; Tolksdorf, R., Triebel, D. 2014. Towards an Integrated Biodiversity and Ecological Research Data Management and Archiving Platform: The German Federation for the Curatin of Biological Data (GFBio). – In: Plödereder, Grunske, Schneiner (eds): Infformatik 2014 – Big Data Komplexität meistern, LNI-Reihe (P-232), Köllen Verlag pdf.

• Hagedorn, G., Plank, A., Link, A., Rambold, G. & Triebel, D. 2014. DiversityDescriptions information model (version 3.00.11, 18 September 2014). – http://www.diversityworkbench.net/Portal/DescriptionsModel_v3.00.11.

• Hagedorn, G., Plank, A., Link, A., Rambold, G. & Triebel, D. 2014. DiversityDescriptions information model (version 3.00.10, 17 July 2014). – http://www.diversityworkbench.net/Portal/DescriptionsModel_v3.00.10. (version for quiz)

• Hagedorn, G., Plank, A., Link, A., Rambold, G. & Triebel, D. 2014. DiversityDescriptions information model (version 3.00.09, 13 March 2014). – http://www.diversityworkbench.net/Portal/DescriptionsModel_v3.00.09.

• Hagedorn, G., Plank, A., Link, A., Rambold, G. & Triebel, D. 2014. DiversityDescriptions information model (version 3.00.08, 13 January 2014). – http://www.diversityworkbench.net/Portal/DescriptionsModel_v3.00.08.

• Rambold, G., Elix, J. A., Heindl-Tenhunen, B., Köhler, T., Nash III, T. H., Neubacher, D., Reichert, W., Zedda, L. & Triebel, D. 2014. LIAS light – Towards the ten thousand species milestone. – MycoKeys 8 : 11–16. doi: 10.3897/mycokeys.8.6605 pdf.

• Schneider, T. 2014. Domänspezifische Evaluation und Optimierung von Datenstandards und Infrastrukturen. – 449pp. Dissertation, Universität Bayreuth.

• Simmel, J. 2014 ("2013"). IBF Fungi – Großpilz-Kartierung mit Smartphone und GPS. Ergebnisse des zweiten Projektteils. – Hoppea, Denkschr. Regensb. Bot. Ges. 74: 201–224.

• Triebel, D., Peršoh, D., Klaster, S. & Rambold, G. 2014. Omics and meta’omics dataflows in mycology. – In Anonymous (ed.), IMC10 eBook of Abstracts: 219. Bangkok.

• Triebel, D., Weibulat, T. & Bensch, K. 2014. Sammlungsschätze online – Schritte zur Virtuellen Naturhistorischen Sammlung. – Natur im Museum. – Mitteilungen der Fachgruppe Naturwissenschaftliche Museen im Deutschen Museumsbund 4: 31–35. pdf.

• Weibulat, T., Rollinger, G., Reichert, W., Weiss, M., Neubacher, D., Volz, B., Rambold, G. & Triebel, D. 2014. DiversityMobile – a smartphone application for monitoring ecological and biodiversity data in the field GfÖ 2014 44th annual meeting. Abstract Volume: 308.

• Weibulat, T., Weiss, M., Reichert, W., Sanz, V., Link, A., Rambold, G. & Triebel, D. 2014. The Diversity Workbench – a research data management platform as part of the GFBio infrastructure GfÖ 2014 44th annual meeting. Abstract Volume: 305.

• Weiss, M., Reichert, W. & Triebel, D. 2014. DiversityGazetteers information model (version 01.03.05, 1 July 2014). – http://diversityworkbench.net/Portal/GazetteersModel_v01.03.05.

• Weiss, M., Reichert, W. & Triebel, D. 2014. DiversitySamplingPlots information model (version 03.00.05, 1 July 2014). – http://diversityworkbench.net/Portal/SamplingPlotsModel_v03.00.05.

• Werner, S., Bensch, K., Beck, A., Neubacher, D., Reichert, W., Reiß, P. & Triebel, D. 2014. Multi-layered digitization of research-relevant objects using focus stacking technologies and a software-controlled movable table. – In: Mallison, H., Vogel, J. & Belvedere, M. (eds.): Digital Specimen 2014 – Abstracts of Presentations. Museum für Naturkunde Berlin. – http://www.naturkundemuseum-berlin.de/forschung/tagungen/digitalspecimen-berlin-2014/home/abstracts-of-presentations/.

• Hagedorn, G., Plank, A., Link, A., Rambold, G. & Triebel, D. 2013. DiversityDescriptions information model (version 3.00.07, 10 September 2013). – http://www.diversityworkbench.net/Portal/DescriptionsModel_v3.00.07.

• Spelda, J., Oliveira-Biener, U., Lehmann, T., Werner, S., Turini, F., Beck, A., Weibulat, T., Triebel, D. & Melzer, R. 2013. Innovative digitalisation techniques for GBIF: Workstations at the Munich nodes, diplopod gonopods as a case study . – BioSyst.EU 2013 Global systematics! Abstract-Volume: 208–209.

• Triebel, D., Weiss, M., Neubacher, D., Reichert, W., Hagedorn, G. & Rambold, G. 2013. Diversity Workbench – Mobilisation of high quality species occurrence data for GBIF. – BioSyst.EU 2013 Global systematics! Abstract-Volume: 219.

• Weibulat, T., Rollinger, G., Reichert, W., Weiss, M., Neubacher, D., Volz, B., Rambold, G. & Triebel, D. 2013. DiversityMobile as part of the Diversity Workbench platform – a data pipeline from smartphone recording up to GBIF Access. – TDWG Biodiversity Information Standards Conference 2013 Abstract-Volume.

• Weibulat, T., Triebel, D., Schneider, T., Reichert, W., Volz, B., Weiss, M. & Rambold, G. 2013. DiversityMobile – Recording and Processing Data in the Field via Smartphone. – BioSyst.EU 2013 Global systematics! Abstract-Volume: 229.

• Weiss, M., Hagedorn, G. & Triebel, D. 2013. DiversityProjects information model (version 02.00.02, 8 April 2013). – http://diversityworkbench.net/Portal/ProjectsModel_v02.00.02.

• Schnittler, M., Weibulat, T. & Triebel, D. 2012. Mit dem Smartphone auf Expedition im Kaukasus – IBF-Projekt verlängert. – GfBS Newsletter 26: 15–17. download

• Simmel, J. 2012 ("2011"). IBF Fungi – Großpilz-Kartierung mit Smartphone und GPS. Ein Beispiel aus dem Raum Regensburg. – Hoppea, Denkschr. Regensb. Bot. Ges. 72: 139–170.

• Triebel, D., Hagedorn, G. & Rambold, G. 2012. An appraisal of megascience platforms for biodiversity information. – MycoKeys 5: 45–63. – doi:10.3897/mycokeys.5.4302; pdf.

• Triebel, D., Weiss, M. & Volz, B. 2012. Diversity Workbench: Software-Demonstration – GfBS 13. Jahrestagung Bonn Abstract-Band: 88–89.

• Weiss, M., Hagedorn, G. & Triebel, D. 2012. DiversityCollection information model (version 2.05.17, 15 February 2012). – http://www.diversityworkbench.net/Portal/CollectionModel_v2.05.17.

• Weiss, M., Triebel, D., Reichert, W., Schneider, T., Weibulat, T. & Rambold, G. 2012. User interfaces for data transfer as part of the Diversity Workbench platform. – Verh. Ges. Ökologie 42: 84–85.

• Hagedorn, G., Weiss, M. & Triebel, D. 2011. DiversityTaxonNames information model (version 2.4, 5 January 2011). – http://www.diversityworkbench.net/Portal/TaxonNamesModel_v2.4.

• Schneider, T., Weiss, M. & Triebel, D. 2011. DiversityMobile information model (version 1.2, 20 September 2011). – http://www.diversityworkbench.net/Portal/MobileModel_v1.2

• Schneider, T., Weiss, M. & Triebel, D. 2010. DiversityMobile information model (version 1.0, 10 August 2010). – http://www.diversityworkbench.net/Portal/MobileModel_v1.0.

• Triebel, D., Neubacher, D., Weiss, M., Heindl-Tenhunen, B., Nash. T. H. III & Rambold, G. 2010. Integrated biodiversity data networks for lichenology – data flows and challenges. – In Nash, T.H. III, Geiser, L., McCune, B., Triebel, D., Tomescu, A.M.F. & Sanders, W.B. (eds.), Biology of lichens – symbiosis, ecology, environmental monitoring, systematics and cyber applications. – Biblioth. Lichenol. 105: 47–56.

• Weiss, M., Hagedorn, G. & Triebel, D. 2010. DiversityCollection information model (version 2.05.10, 16 December 2010). – http://www.diversityworkbench.net/Portal/CollectionModel_v2.05.10.

• Weiss, M., Hagedorn, G. & Triebel, D. 2010. DiversityScientificTerms information model (version 1.0, 20 April 2010). – http://www.diversityworkbench.net/Portal/DiversityScientificTermsModel_v1.0.

• Weiss, M., Hagedorn, G. & Triebel, D. 2010. DiversityCollection information model (version 2.05.09, 12 March 2010). – http://www.diversityworkbench.net/Portal/CollectionModel_v2.05.09.

• Hagedorn, G., Weiss, M. & Triebel, D. 2009. DiversityTaxonNames information model (version 2.2, 20 October 2009). – http://www.diversityworkbench.net/Portal/TaxonNamesModel_v2.2.

• Jablonski, S., Kehl, A., Neubacher, D., Poschlod, P., Rambold, G., Schneider, T., Triebel, D., Volz, B. & Weiss, M. 2009. DiversityMobile – Mobile data retrieval platform for biodiversity research projects. – In Fischer, S., Maehle, E. & Reischuk, R. (eds.), Informatik 2009 – Im Focus das Leben. Beiträge der 39. Jahrestagung der Gesellschaft für Informatik e. V. (GI). GI-Edition: Lecture Notes in Informatics (LNI) – Proceedings 154: 27, 610–624. download

• Triebel, D. 2009. Pilzherbarien – Neue Aufgaben im Bereich Biodiversitätsinformatik und Datenmanagement. – In Anonymous (ed.), Rundgespräche der Kommission für Ökologie, herausgegeben von der Bayerischen Akademie der Wissenschaften, Band 37: Ökologische Rolle von Pilzen. – 131–145. München. download

• Weiss, M., Hagedorn, G., & Triebel, D. 2009. DiversityAgents information model (version 2.1, 22 October 2009). – http://www.diversityworkbench.net/Portal/DiversityAgentsModel_v2.1.

IBF contributions given at national and international meetings starting with 2009:

only the lecturers and presenters are cited; information in detail under News & Events and IBF Publication, in the case that Abstracts are published

• Triebel, D. 2014. The concept of the Diversity Workbench (lecture).

• Weibulat, T. 2014. The Diversity Workbench – a research data management platform as part of the GFBio infrastructure (lecture).

• Weibulat, T. 2014. A Smartphone Application for Monitoring Ecological and Biodiversity Data in the Field (poster).

• Triebel, D. 2013. Diversity Workbench – Mobilisation of high quality species occurrence data for GBIF (lecture).

• Weibulat, T. 2013. Diversity Workbench – Datenmanagement in Projekten der Global Plants Initiative und der GBIF-Deutschland Knoten (lecture/ software demonstration).

• Weibulat, T. 2013. DiversityMobile as part of the Diversity Workbench platform – a data pipeline from smartphone recording up to GBIF Access (lecture/ software demonstration).

• Weibulat, T. 2013. Dataflow DiversityMobile – DWB databases (software demonstration).

• Weibulat, T. 2013. DiversityMobile – Recording and Processing Data in the Field via Smartphone (software demonstration).

• Hagedorn, G. 2012. Diversity Workbench – a virtual research environment for biodiversity data (poster).

• Triebel, D. 2012. Mobilisierung von organismenbezogenen Forschungsdaten mittels Schnittstellen der Diversity Workbench (lecture).

• Triebel, D. 2012. LIAS and MELnet – two Global Species Databases managed at the Staatliche Naturwissenschaftliche Sammlungen Bayerns (lecture).

• Triebel, D. 2012. Data Exchange and Processing in Digital Science Infrastructure Platforms for Biodiversity Information (lecture).

• Triebel, D. 2012. IndExs – an Online Thesaurus for Standard Bibliographic Data on Exsiccatae in Botany and Mycology (poster).

• Triebel, D. Weiss, M. & Volz, B. 2012 Diversity Workbench: Software-Demonstration (lecture).

• Weibulat, T. 2012. User interfaces for data transfer as part of the Diversity Workbench platform (lecture).

• Weiss, M. 2012. Diversity Workbench – Software zum Management von Biodiversitätsdaten (lecture).

• Triebel, D. 2011. NaviKey – a Java-based Application for Multi-access Taxon Identification (lecture).

• Triebel, D. 2011. IndExs – An Online Thesaurus for Standard Bibliographic Data on Exsiccatae in Botany and Mycology (poster).

• Triebel, D. 2011. The Diversity Workbench – a virtual biodiversity research environment (poster).

• Weiss, M. 2011. NaviKey – a Java-based Application for Multi-access Taxon Identification and its deployment in the information system for lichens LIAS. (lecture).

• Weiss, M. 2011. The Diversity Workbench – a virtual biodiversity research environment (poster).

• Bensch, K. (neé Schubert, K.) 2010. Integrated data network for phytopathogenic fungi: a case study using Erysiphales taxa (lecture).

• Triebel, D. 2010. Mobile Erfassung von Biodiversitätsdaten, ihre Prozessierung und nachhaltige Bereitstellung in einer virtuellen Forschungsumgebung (lecture).

• Triebel, D. 2010. Setting up an Information Network on Biological Research Data Gained in the Field up to the Sustainable Storage in a Primary Data Repository (I-B-F) (lecture)

• Kehl, A. 2009. Data repositories for biodiversity and ecology research (lecture).

• Kehl, A. 2009. Dataflow from the field to a data repository: small-scale distribution of plant galls as use case (lecture).

• Schneider, T. 2009. DiversityMobile – Mobile Data Retrieval Platform for Biodiversity Research Projects (lecture).

• Schneider, T. 2009. The Diversity Workbench Framework: Data Retrieval with DiversityMobile and Dataflow from DiversityMobile to GBIF (poster).

• Triebel, D. 2009. Aufbau eines Informationsnetzes für biologische Forschungsdaten von der Erhebung im Feld bis zur nachhaltigen Sicherung in einem Primärdatenrepositorium (IBF) (lecture).

• Triebel, D. 2009. Pilzherbarien – Biodiversitätsinformatik (lecture).

• Triebel, D. 2009. Developing a sustainable working platform for gathering biological data in the field (poster).

• Weiss, M. 2009. The Diversity Workbench framework as data repository for biological data (poster).

Publications between 2006 and 2008 in the DiversityMobile and IBF context:

• Hagedorn, G. 2008/2007. Structuring descriptive data of organisms – Requirement analysis and information models. – 1–417. Dissertation, Universität Bayreuth.

• Hagedorn, G., Weiss, M. & Triebel, D. 2008. DiversityExsiccatae information model (version 2.0, 10 March 2008). – http://www.diversityworkbench.net/Portal/DiversityExsiccataeModel_v2.0.

• Hagedorn, G., Weiss, M. & Triebel, D. 2008. DiversityTaxonNames information model (version 2.1, 20 February 2008). – http://www.diversityworkbench.net/Portal/TaxonNamesModel_v2.1.

• Kehl, A. 2006. Wirtsselektivität gallinduzierender Pflanzenwespen (Hymenoptera, Tenthredinidae) an Weiden (Salix spp.): die Bedeutung von Phänotyp und Genotyp im Salix alba/S. fragilis-Komplex für die Belegung mit Gallen. Dissertation, Universität Bayreuth.

• Triebel, D., Agerer, R., Begerow, D., Boyle, H., Deml, G., Hagedorn, G., Oberwinkler, F., Rambold, G., Schnittler, M., Scholz, R. & Sipman, H.J.M. 2006. Aufbau des deutschen GBIF Knotens für Mykologie: Schlussbericht. – http://www.gbif-mycology.de/PDFs/Schlussbericht_BMBF01LI0202.pdf. – 1–67. München.

• Triebel, D., Peršoh, D., Nash, T.H. III, Zedda, L. & Rambold, G. 2007. Chapter 8. LIAS – an interactive database system for structured descriptive data of Ascomycetes. – In Currey, G.B. & Humphries, C.J. (eds.), Biodiversity databases. Techniques, politics, and applications. The Systematics Association Special 73: 99–110.

• Weiss, M., Hagedorn, G. & Triebel, D. 2007. DiversityCollection information model (version 2.05, 1 November 2007). – http://www.diversityworkbench.net/Portal/CollectionModel_v2.05.

DiversityMobile and Diversity Workbench: News and Reviews

• Ziel: Dauerhafter Fluss biologischer Daten vom Untersuchungsgebiet zum Datendepot. Universität Bayreuth Medienmitteilung 006/2009

• Anbindung von Biodiversitätsdaten der SNSB an GBIF 2011

• MELnet - Spotlight on a contributing global species database, 4D4Life e-bulletin 5, Nov 2011: 3

• DFG-Projekt wird fortgesetzt: Expedition mit Smartphones im Kaukasus. GBIF.DE News 12/2011

• Herbarium Marburgense: Wertvoller Datenzuwachs. GBIF.DE News 02/2012

• Neu an GBIF angebunden: Spinnensammlung des Staatlichen Museums für Naturkunde Karlsruhe. GBIF.DE News 04/2012

• Neu an GBIF angebunden: Pilzsammlung von Helga Große-Brauckmann. GBIF.DE News 06/2012

• Projekt IDES digitalisiert fossile und rezente Fische.GBIF.DE News 02/2013

• GBIF Annual Report 2012. Reference to DWB Workshops 2012 on page 27 [31].

• Neu bei GBIF: Referenzdaten zu Arthropoden-Umweltstudien in Süddeutschland. GBIF.DE News 07/2013

• Projekt IDES digitalisiert fossile und rezente Fische. – GfBS Newsletter 28: 27–28.

• Floristische Daten aus Bayern für GBIF. GBIF.DE News 12/2013

• 20. Diversity Workbench Workshop – über 200 Teilnehmer seit 2007. GBIF.DE News 2/2014

• Von Fischen bis zu Kleinalgen – kontinuierlicher Datenfluss von der Diversity Workbench zu GBIF. GBIF.DE News 8/07/2014

• GFBio Press Release 2014-09-24: http://www.gfbio.org/news-events and http://www.gfbio.org/widget/web/guest/news-events/-/56_INSTANCE_UwIzMmzn76N2

Further related publications

• Hagedorn G., Weber G., Plank A., Giurgiu M., Homodi A., Veja C., Schmidt G., Mihnev P., Roujinov M., Triebel D., Morris, R. A., Zelazny, B., van Spronsen, E., Schalk, P., Kittl,C., Brandner, R., Martellos, S., Nimis, P. L. 2010. An online authoring and publishing platform for field guides and identification tools. – In Nimis PL, Vignes Lebbe R. (eds.), Tools for identifying biodiversity: progress and problems. – 13–18. Paris. download