Difference between revisions of "Taxon lists for DiversityMobile"
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*Species checklists/ taxon reference lists are essential as underlying standard lists (backbones) for presentation services and (search) interfaces (e. g. as scroll lists). They are needed as dynamic service (database views and exports, web services) and as non-dynamic exports in various schemas and formats for external local database applications. | *Species checklists/ taxon reference lists are essential as underlying standard lists (backbones) for presentation services and (search) interfaces (e. g. as scroll lists). They are needed as dynamic service (database views and exports, web services) and as non-dynamic exports in various schemas and formats for external local database applications. | ||
| − | *'''DTN taxon lists''' might be created (a) by direct import from tab separated list files in the DWB environment, (b) by using the freely available (global) name thesauri e. g. via web services of Catalogue of Life (CoL) and IndexFungorum to create a taxon list in a DTN database or, (c) by adding the relevant list information to the global nomenclators and species databases already available as '''project''' in a '''DTN database''' of any DWB environment (e.g. GBIFnomenmyx, LIASnames, MELnames, MSWnames in the DWB environment of the SNSB, and UBTgallnames in the open TNT environment). | + | *'''DTN taxon lists''' might be created (a) by direct import from tab separated list files in the DWB environment, (b) by using the freely available (global) name thesauri e. g. via web services of Catalogue of Life (CoL) and IndexFungorum to create a new DTN taxon list in a DTN database or, (c) by adding the relevant list information to the global nomenclators and species databases already available as '''project''' in a '''DTN database''' of any DWB environment (e.g. GBIFnomenmyx, LIASnames, MELnames, MSWnames in the DWB environment of the SNSB, and UBTgallnames in the open TNT environment). |
*The existing '''DTN taxon lists''' in the context of IBF, LIAS and GBOL are built by either the method (a) or (c). They rely on expert taxonomists (= '''list curators''') who collect information from published resources as national checklists and taxonomic thesauri as the "Global Species Databases" from the Catalogue of Life initiative ([http://www.catalogueoflife.org/info/databases GSDs]). | *The existing '''DTN taxon lists''' in the context of IBF, LIAS and GBOL are built by either the method (a) or (c). They rely on expert taxonomists (= '''list curators''') who collect information from published resources as national checklists and taxonomic thesauri as the "Global Species Databases" from the Catalogue of Life initiative ([http://www.catalogueoflife.org/info/databases GSDs]). | ||
Revision as of 17:18, 10 June 2012
- The IBF project/ DiversityMobile (smartphone app, app for Tablet PCs), the German Barcode of Life (=GBOL) project as well as other biodiversity research projects depend on national/ regional species checklists/ taxon reference lists. Such lists can be managed by DiversityTaxonNames (=DTN) databases in a Diversity Workbench (= DWB) environment.
- Species checklists/ taxon reference lists are essential as underlying standard lists (backbones) for presentation services and (search) interfaces (e. g. as scroll lists). They are needed as dynamic service (database views and exports, web services) and as non-dynamic exports in various schemas and formats for external local database applications.
- DTN taxon lists might be created (a) by direct import from tab separated list files in the DWB environment, (b) by using the freely available (global) name thesauri e. g. via web services of Catalogue of Life (CoL) and IndexFungorum to create a new DTN taxon list in a DTN database or, (c) by adding the relevant list information to the global nomenclators and species databases already available as project in a DTN database of any DWB environment (e.g. GBIFnomenmyx, LIASnames, MELnames, MSWnames in the DWB environment of the SNSB, and UBTgallnames in the open TNT environment).
- The existing DTN taxon lists in the context of IBF, LIAS and GBOL are built by either the method (a) or (c). They rely on expert taxonomists (= list curators) who collect information from published resources as national checklists and taxonomic thesauri as the "Global Species Databases" from the Catalogue of Life initiative (GSDs).
- The content of DTN taxon lists has to be continuously updated. The list curators will be responsible for managing that data preferably by using the DTN .Net clients on their desktops.
- Additions and corrections are welcome and might be sent to the respective list curators or to the persons responsible for the common taxonomy of major initiatives or projects like LIAS and GBOL.
- To document the content of the lists currently used in the IBF, LIAS and GBOL context and enlarge the acceptance within the project communities they will be accessible for open and free download as csv, xls, xml files via the GBOL portal, the GBIF-D portal and the DiversityMobile Wiki.
- The DTN taxon lists do not compete against commented reference checklists/ red lists etc., published e. g. by the Bundesamt für Naturschutz as regular citable and copyrighted publications. They are non-commented outputs of a relational database system.
Animalia varia - DTN taxon lists
| Organisms covered | Country/ region covered | DTN List number of taxa | DTN List Resource name | DTN List curators | DTN List release date | Downloads (csv, xls, xml) |
|---|---|---|---|---|---|---|
| Arachnida ["Rest", exkl. Araneae, Pseudoscorpiones] | Germany | ? | TaxRef_GBOL_Arachnida_DE | 3 | 3 | |
| Pseudoscorpiones | Germany | ? | TaxRef_GBOL_Pseudoscorpiones_DE | Björn Rulik | 3 | 3 |
| Araneae | Germany | ? | TaxRef_GBOL_Araneae_DE | Dr. Hubert Höfer | 3 | 3 |
| Chilopoda | Germany | ? | TaxRef_GBOL_Chilopoda_DE | Dr. Thomas Wesener | 3 | 3 |
| Diplopoda | Germany | ? | TaxRef_GBOL_Diplopoda_DE | Dr. Thomas Wesener | 3 | 3 |
| Symphyla | Germany | ? | TaxRef_GBOL_Symphyla_DE | ? | 3 | 3 |
| Pauropoda | Germany | ? | TaxRef_GBOL_Pauropoda_DE | ? | 3 | 3 |
| Malacostraca | Germany | ? | TaxRef_GBOL_Malacostraca_DE | ? | 3 | 3 |
| Eumalacostraca | Germany | ? | TaxRef_GBOL_Eumalacostraca_DE | ? | 3 | 3 |
| Heterotardigrada | Germany | ? | TaxRef_GBOL_Heterotardigrada_DE | ? | 3 | 3 |
Insecta - DTN taxon lists
| Organisms covered | Country/ region covered | DTN List number of taxa | DTN List Resource name | DTN List curators | DTN List release date | Downloads (csv, xls, xml) |
|---|---|---|---|---|---|---|
| Orthoptera (Grashoppers) | Germany | 88 | TaxRef_SNSB_Orthoptera_DE | S. Ingrisch, H. Schott | 3 | 3 |
| Collembola | Germany | ? | TaxRef_GBOL_Collembola_DE | ? | 3 | 3 |
| Neuroptera | Germany | ? | TaxRef_GBOL_Neuroptera_DE | ? | 3 | 3 |
| Coleoptera | Germany | ? | TaxRef_GBOL_Coleoptera_DE | Dr. Dirk Ahrens | 3 | 3 |
| Diptera | Germany | ? | TaxRef_GBOL_Diptera_DE | Björn Rulik | 3 | 3 |
| Ephemeroptera | Germany | ? | TaxRef_GBOL_Ephemeroptera_DE | ? | 3 | 3 |
| Auchenorrhyncha | Germany | ? | TaxRef_GBOL_Auchenorrhyncha_DE | Björn Rulik | 3 | 3 |
| Heteroptera | Germany | ? | TaxRef_GBOL_Heteroptera_DE | Dr. Carsten Morkel | 3 | 3 |
| Mecoptera | Germany | ? | TaxRef_GBOL_Mecoptera_DE | ? | 3 | 3 |
| Phthiraptera | Germany | ? | TaxRef_GBOL_Phthiraptera_DE | ? | 3 | 3 |
| Psocoptera | Germany | ? | TaxRef_GBOL_Psocoptera_DE | ? | 3 | 3 |
| Raphidioptera | Germany | ? | TaxRef_GBOL_Raphidioptera_DE | ? | 3 | 3 |
| Saltatoria | Germany | ? | TaxRef_GBOL_Saltatoria_DE | ? | 3 | 3 |
| Siphonaptera | Germany | ? | TaxRef_GBOL_Siphonaptera_DE | ? | 3 | 3 |
| Strepsiptera | Germany | ? | TaxRef_GBOL_Strepsiptera_DE | ? | 3 | 3 |
| Thysanoptera | Germany | ? | TaxRef_GBOL_Thysanoptera_DE | ? | 3 | 3 |
| Trichoptera | Germany | ? | TaxRef_GBOL_Trichoptera_DE | ? | 3 | 3 |
| Zoraptera | Germany | ? | TaxRef_GBOL_Zoraptera_DE | ? | 3 | 3 |
Vertebrata - DTN taxon lists
| Organisms covered | Country/ region covered | DTN List number of taxa | DTN List Resource name | DTN List curators | DTN List release date | Downloads (csv, xls, xml) |
|---|---|---|---|---|---|---|
| Amphibia | Germany | ? | TaxRef_GBOL_Amphibia_DE | Dr. Dennis Rödder | 3 | 3 |
| Reptilia | Germany | ? | TaxRef_GBOL_Reptilia_DE | Dr. Dennis Rödder | 3 | 3 |
| Aves | Germany | ? | TaxRef_GBOL_Aves_DE | Dr. Renate van den Elzen | 3 | 3 |
| Mammalia | Germany | ? | TaxRef_GBOL_Mammalia_DE | Dr. Rainer Hutterer | 3 | 3 |
| "Pisces et Cyclostomata" | Germany | ? | TaxRef_GBOL_Pisces_DE | Dr. Matthias Geiger | 3 | 3 |
Fungi and Lichens - DTN taxon lists
| Organisms covered | Country/ region covered | DTN List number of taxa | DTN List resource name | DTN List curators | DTN List release date | Downloads (csv, xls, xml) |
|---|---|---|---|---|---|---|
| Powdery mildews | Germany | ? | TaxRef_LIAS_Erys_DE | K. Bensch | 3 | 3 |
| Lichens | Germany | ? | TaxRef_LIAS_Lichens_DE | W. von Brackel, ? P. Scholz, D. Triebel | 3 | 3 |
| Lichen-associated fungi | Germany | ? | TaxRef_LIAS_LichFungi_DE | W. von Brackel, D. Triebel | 3 | 3 |
| Lichens | United Kingdom | ? | TaxRef_LIAS_Lichens_UK | D. Triebel | 3 | 3 |
| Lichen-associated fungi | United Kingdom | ? | TaxRef_LIAS_LichFungi_UK | D. Triebel | 3 | 3 |
| Ascomycetes - higher classification | - | ? | TaxRef_LIAS_Myconet | T. H. Lumbsch, D. Triebel | 3 | 3 |
Myxomycetes - DTN taxon lists
| Organisms covered | Country/ region covered | DTN List number of taxa | DTN List Resource name | DTN List curators | DTN List release date | Downloads (csv, xls, xml) |
|---|---|---|---|---|---|---|
| Slime moulds | Germany | 380 | TaxRef_SNSB_Myxomycetes_DE | ? A. Kuhnt, ? M. Schnittler | 3 | 3 |
Plants - DTN taxon lists
| Organisms covered | Country/ region covered | DTN List number of taxa | DTN List Resource name | DTN List curators | DTN List release date | Downloads (csv, xls, xml) |
|---|---|---|---|---|---|---|
| Vascular plants | Germany | ? | TaxRef_BfN_VPlants | W. Ahlmer, S. Klotz | 3 | 3 |
| Pteridophytes (= horsetails, ferns, club mosses, quillworts) | Germany | ? | TaxRef_GBOL_Pteridophyta_DE | ? J. Heinrichs, ? M. Nebel | 3 | 3 |
| Liverworts | Germany | 291 | TaxRef_GBOL_Liverworts_DE | ? J. Heinrichs, ? M. Nebel | 3 | 3 |
| Hornworts | Germany | ? | TaxRef_GBOL_Hornworts_DE | ? J. Heinrichs, ? M. Nebel | 3 | 3 |
Plant galls - DTN taxon lists
| Organisms covered | Country/ region covered | DTN List number of taxa | DTN List Resource name | DTN List curators | DTN List release date | Downloads (csv, xls, xml) |
|---|---|---|---|---|---|---|
| Plant gall inducing organisms | Germany | c. ? | TaxRef_UBT_Galls_DE | G. Rambold, A. Guhr | 3 | 3 |
DTN databases in the DWB virtual server environment "TNT"
There are DTN databases (with name projects and DTN taxon lists) for each major organism group in the DWB virtual server environment "TNT". The DTN taxon lists are accessible for web applications, e. g. through the DWB web editor for GBOL. list curators will have access to edit names data.
DiversityTaxonNames_Animalia
Project: GBOLnames with DTN taxon lists (=TaxRefLists): see table above.
DiversityTaxonNames_Insecta
Project: GBOLnames with DTN taxon lists (=TaxRefLists): see table above.
Project: IBFnames with DTN taxon lists (=TaxRefLists): see table above.
DiversityTaxonNames_Vertebrata
Project: GBOLnames with DTN taxon lists (=TaxRefLists): see table above.
DiversityTaxonNames_Fungi
Project: GBOLnames with DTN taxon lists (=TaxRefLists): see table above.
Project: LIASnames with DTN taxon lists (=TaxRefLists): see table above.
DiversityTaxonNames_Myxomycetes
Project: GBIFnomenmyx with DTN taxon lists (=TaxRefLists): see table above.
DiversityTaxonNames_Plants
Project: GBOLnames with DTN taxon lists (=TaxRefLists): see table above.
DiversityTaxonNames_Galls
Project: UBTgallnames with DTN taxon lists (=TaxRefLists): see table above.
DiversityMobile database in the DWB virtual server environment "TNT"
The database DiversityMobile_TNT is designed for access by the DiversityMobile applications for smartphones. It gives open and free read only access to all DTN taxon lists (=TaxRefLists) available in the TNT environment.
Notes und Infos (später zu löschen):
German Barcode of Life (GBOL) information:
https://www.bolgermany.de/team/projekte
https://www.bolgermany.de/gbol/organismengruppen
https://www.bolgermany.de/gbol/organismengruppen/landpflanzen-pilze
GBOL Taxonkoordinator: Björn Rulik (b.rulik@zfmk.de) Barcoding Fauna Bavarica (BFB) information:
http://www.faunabavarica.de/taxa1-1
Ref. Myxomyxetes Deutschland:
Schnittler, M., Kummer, V., Kuhnt, A., Krieglsteiner, L., Flatau, L., Müller, H. & Täglich, U. 2011 Rote Liste und Gesamtartenliste der Schleimpilze (Myxomycetes) Deutschlands. Naturschutz und Biologische Vielfalt 70 (6): 125-234. p. 138 GBIF-D erwähnt
und http://www.gbif-mycology.de/DatabaseClients/GBIFmyxchecklist/
siehe http://www.diversitymobile.net/wiki/DiversityTaxonNames_Artenlisten