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2023-09-07T07:07:47Z

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{| border="0" align="right" style="border-collapse:collapse; background-color:transparent;" cellpadding="9"
|[[File:DNK_Screenshot_LoadDatabase.jpg|right|140px|DiversityNaviKey – Mobile Query © SNSB IT Center'']]
|[[File:DNK_Screenshot_LIASLight.jpg|right|140px|DiversityNaviKey – Mobile Result © SNSB IT Center'']]
|[[File:DNK_Screenshot_Deemy.jpg|right|140px|DiversityNaviKey - Mobile © SNSB IT Center'']]
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Currently six data sources are open and freely available for diagnosis and identification purposes with use of [[DiversityNaviKey]] and data access via web servers of the [https://www.snsb.info SNSB IT Center]. They are from different scientific fields (botany, mycology, lichenology, bacteriology, chemistry, sociology). The data management is done in three independent installations of DiversityDescriptions (DD_BFL, DD_GFBIO and DD_LIAS) at the SNSB IT Center.

The by far largest dataset is that on lichen trait data provided by the long-term information system [http://www.lias.net/ LIAS].

For current software releases see '''https://divnavikey.snsb.info'''.

The table below describes the single datasets.

{| class="wikitable"
{|border=1 cellpadding="5" style="margin:1em 1em 1em 0; background:#FFFFFF;border:1px #AAA solid; border-collapse:collapse; empty-cells:show;"
|-style="text-align:left; style="vertical-align:top; background:#D3D3D3;"
! DiversityNaviKey code and project logo
! Title and description of the data source (dataset)
! Responsible/ author(s)
! [https://creativecommons.org/licenses/ Creative Commons Licenses (CC)] (textual data and hosted images)
! Number of items, number of item values (•)
! Number of descriptors, number of categorical descriptor states (•)
! Number of linked images and documents hosted by SNSB
! Linked internet resources
! Access point with citation (e.g. re3data, DOI)
! References and notes
|-style="vertical-align:top;
|BELMONTsurveydesc (••) [[File:bf-logo.png|x24px|link=https://www.belmontforum.org/|BelmontSurveydesc]]       ||[[Belmont Forum Open Data Survey 2014]]||Schmidt, Birgit; Gemeinholzer, Birgit; Treloar, Andrew; Hodge, Jonathan; Santanchè, André; Oakley, Kim||CC BY||1,328 items with 63,123 categorical state values and 1,490 text values ||80 descriptors with 69 categorical descriptors (238 categorical states), 11 free text descriptors ||-||-||Raw data as csv-files under https://zenodo.org/record/16384#; see http://doi.org/10.5281/zenodo.608984 for all versions || Schmidt, B., Gemeinholzer, B., Treloar, A (2016): Open Data in Global Environmental Research: The Belmont Forum's Open Data Survey. PLOS One, DOI: 10.1371/journal.pone.0146695; https://data.snsb.info/dataset/gfbio/projects_gfbio/968. (DD_GFBIO)
|- style="vertical-align:top; background:#F5F5F5;"
|BFLheilpflanzendesc (•••) [[File:89px_FloraVonBayern_logo_end_weiss.png|x65px|link=http://artenquiz.bayernflora.de/|BFL Heilpflanzen]]     || [[Artenquiz zum Thema Heilpflanzen in Bayern]]||Hagedorn, Gregor; Plank, Andreas; Leininger, Iris; Link, Anton||CC BY ... CC BY SA ||197 items with 3,210 categorical state values||15 descriptors with 15 categorical descriptors (115 categorical states) ||2,166 images and other resource links of items, 157 images codes of categorical states||+||-|| see also under [https://diversityworkbench.net/Portal/DiversityDescriptions_Implementations DiversityDescriptions_Quiz] and [http://biowikifarm.net/meta/Artenquiz_documentation Artenquiz Documentation]; dataset will be further expanded as regards content. (DD_BFL)
|-style="vertical-align:top;
|DEEMY [[File:Deemy_small.gif|x65px|link=http://www.deemy.de/|Deemy]]      || [[DEEMY – An Information System for Characterization and DEtermination of EctoMYcorrhizae]] ||Agerer, Reinhard; Rambold, Gerhard||CC BY-NC-ND||554 items with 63,806 categorical state values, 38,270 quantitative values, 928 text values ||498 descriptors with 341 categorical descriptors (1,336 categorical states), 154 quantitative, 3 free text descriptors||177 images of items, 59 images of descriptors, 596 images of categorical states, accessed via URIs from SNSB image webserver ||- ||re3data.org: DEEMY; editing status 2019-01-24; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3ZF5V last accessed: 2021-08-04||(DD_GFBIO)
|- style="vertical-align:top; background:#F5F5F5;"
|DSMZbacdivedesc (••) [[File:BacDiveLogo.png|x45px|link=https://bacdive.dsmz.de/|DSMZbacdivedesc]]         ||[[Mobilisation of data for GFBio services – Bacterial Descriptions Use Case]] ||Söhngen, Carola; Bunk, Boyke; Podstawka, Adam; Gleim, Dorothea; Overmann, Jörg||CC BY ||5 items with 589 categorical state values, 158 quantitative values, 208 text values, 4 molecular sequence values ||310 descriptors with 200 categorical descriptors (680 categorical states), 56 quantitative, 54 free text descriptors, 1 sequence descriptor ||-||?||Access points in [http://bacdive.dsmz.de BacDive - The Bacterial Diversity Metadatabase] under [http://bacdive.dsmz.de/index.php?site=search&rd=23454 Blastocatella fastidiosa Foesel et al. 2013 A2_16], [http://bacdive.dsmz.de/index.php?search=24777 Aridibacter kavangonensis Huber et al. 2014 Ac_23_E3], [http://bacdive.dsmz.de/index.php?site=search&rd=24776 Aridibacter famidurans Huber et al. 2014 A22_HD_4H], [http://bacdive.dsmz.de/index.php?site=search&rd=133 Edaphobacter aggregans Koch et al. 2008 emend. Dedysh et al. 2012 Wbg-1], [http://bacdive.dsmz.de/index.php?site=search&rd=132 Edaphobacter modestus Koch et al. 2008 Jbg-1]
|| https://data.snsb.info/dataset/gfbio/projects_gfbio/967. (DD_GFBIO)
|-style="vertical-align:top;
|LIASlight [[File:LiasLight_small_key.gif|link=https://liaslight.lias.net/|x70px|LIAS light]]||[[LIAS light – A Database for Rapid Identification of Lichens]] ||Rambold, Gerhard; Davydov, Evgeny; Elix, John A.; Haiduk, Eva; Nash III, Tom H.; Scheidegger, Christoph; Zedda, Luciana||CC BY-NC-ND ||more than 13,000 items (more than 10,800 published) with more than 554,000 categorical state values, more than 104,000 quantitative values, more than 18,000 text values ||71 descriptors with 58 categorical descriptors (3,091 categorical states), 9 quantitative, 4 free text descriptors||-||+||re3data.org: LIAS; editing status 2019-02-22; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3134N last accessed: 2021-08-04 ||lichen names maintained in [http://liasnames.lias.net/ LIAS names], lichen vocabulary maintained in [https://glossary.lias.net/wiki/ LIAS glossary]. In addition, LIAS light data are accessible in DELTA format to be used locally. For utilisation with the browser-based Java applet NaviKey see http://liaslight.lias.net/Identification/Navikey/World/en_GB/index.html; dataset will be further expanded as regards content.DD (UBTEthnomyc) auf SNSB VM snsb.diversityworkbench.de, 5432. (DD_LIAS)
|- style="vertical-align:top; background:#F5F5F5;"
|LIASmetabolites [[File:LIASmetabolites_small.png|link=https://liaslight.lias.net/Identification/Navikey/Metabolites/index.html|x62px|LIAS metabolites]]       || [[LIAS metabolites – A Database for the Rapid Identification of Secondary Metabolites of Lichens]]||Elix, John A.; Kalb, Klaus; Rupprecht, Johanna; Schobert, Rainer; Rambold, Gerhard ||CC BY-NC-ND||881 items with 5,989 categorical state values, 6,329 quantitative values, 1,637 text values||38 descriptors with 12 categorical descriptors (193 categorical states), 21 quantitative, 5 free text descriptors ||?||+||-|| see also [http://www.anbg.gov.au/abrs/lichenlist/Chem%20Cat%203.pdf Elix 2014]; dataset will be further expanded as regards content. (DD_LIAS)
|-style="vertical-align:top;
| UBTMYCethnomycdesc / EthnoMycAfrica (••••) ||[[EthnoMycAfrica – Ethnomycological knowledge in Africa]]||Kinge, Rosemary Tonjock; Jefwa, Joyce Mnyazi; Houdanon, Roel D.; Kamalebo, Héritier Milenge; Abduzalem, Ahmed; Gryzenhout, Marieka; Rambold, Gerhard||CC BY||1,366 items with 13,490 categorical state values and 6,438 text values ||34 descriptors with 21 categorical descriptors (486 categorical states), 13 free text descriptors ||-||-||-|| item status from '''Mar. 2023''' (DD); [http://www.snsb.info/DiversityDescriptions_UBTMYCethnomycdesc.html HTML Questionnaire for EthnoMycAfrica Database], to run the HTML questionnaire locally please download the [https://diversityworkbench.net/w/media/0/02/DiversityDescriptions_UBTMYCethnomycdesc_2.zip zip-archive]
|-style="vertical-align:top; background:#F5F5F5;"
|}

• ''The numbers of items, descriptors, values are those in the productive DiversityDescriptions databases (SNSB installations; status August 2021) which might be larger than the numbers available for DNK access.''

•• ''The data maintenance, enrichment and data publication is done as part of the the DFG-funded project [https://www.gfbio.org/ German Federation for Biological Data (GFBio)].''

••• ''The data generation, maintenance and data publication is done as part of the project [https://wiki.bayernflora.de/web/Hauptseite Flora von Bayern].''

•••• ''The data generation, maintenance and data publication is done as part of [https://itcer.org/ ITCER e.V.] activities with involvement of [https://www.snsb.info/ SNSB IT Center] and [https://www.nfdi4biodiversity.org/en/ NFDI4Biodiversity].

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Back to [[DiversityNaviKey]]

DWB DiversityNaviKey data sources - Revision history

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